FEATURES

ECOTOXCHIP ANALYSIS

Perform analysis by mapping to the EcoToxChip panel set of 374 genes which are selected by experts to characterize toxic exposures.

INTERACTIVE EXPLORATION

Generate well-known statistical plots (e.g. volcano plot or heatmaps) to analyze toxicogenomics data.

SEVERAL DATA INPUTS

Start analysis using many types of inputs including RNAseq, microarray, gene list or chemicals.

RAW RNA-seq DATA

Process raw RNA-seq files using our customized Galaxy server.

REPORT GENERATION

Summarize all executed steps of analysis into a report for documentation and further study.

PROJECT MANAGEMENT

Create an account for storing data and results and for resuming interactive analysis session.

409

SAMPLES

47

EXPOSURE STUDIES

8

CHEMICALS

6

SPECIES

CASE SCENARIO

REGULATOR

For assessment analysis and report generation
  • EcoToxChip Assessment Tools
  • Report Generation

SCIENTIST

For hypothesis generation and statistical analysis
  • Statistical Analysis
  • Interactive Visualizations
  • Publication quality figures

INDUSTRY

For assessment analysis of EcoToxChip indicators
  • EcoToxChip Analysis and Visualization
  • Report Generation

ACKNOWLEDGEMENTS