EcoToxXplorer

EcoToxChip (qPCR) results file(s) upload

Please upload one or several qPCR files with Ct values produced using EcoToxChip below. For first time users, you are advised to first explore the tools using one of our example datasets.

Specify analysis

Specify organism

Specify chip version

Specify chip size

The same well ID must be used across all files;
All files must have the same number of columns (two columns);
Values should represent raw Ct scores of qPCR;
Missing values need to be written as "NA" and not left empty or blank;
All files must have the same number of rows (e.g., 384 rows);
All files should be uploaded as text (.txt) or CSV (.csv) format;
At most 50 qPCR files can be uploaded.

Choose

Click here to view a sample input file of the 384-well EcoToxChip qPCR plate.

Example qPCR Data

	Analysis	Organism	Description
EcoToxChip-Avian-v1	Differential expression	C. japonica (Japanese quail)	Chlorpyrifos exposure study with 15 samples (5 controls, 5 medium and 5 high dose samples). (Download Original study)
EcoToxChip-Avian-v1	Differential expression	C. japonica (Japanese quail)	Ethinylestradiol exposure study with 15 samples (5 controls, 5 medium and 5 high dose samples). (Download Original study)
EcoToxChip-Avian-v1	Dose-response	C. japonica (Japanese quail)	PCB exposure study with five doses and a control (0, 0.1, 1, 10, 100, 300 ppb). (Download Original study)