FEATURES

ECOTOXCHIP ANALYSIS

Directly analyze EcoToxChip results here to guide decision-making for several ecological species and use cases.

INTERACTIVE EXPLORATION

Generate common statistical plots (e.g., volcano plots or heatmaps) or use novel tools (e.g., EcoToxBMD, EcoToxMods) to analyze toxicogenomics data

SEVERAL DATA INPUTS

Start analysis using many types of inputs including RNAseq, microarray, or qPCR.

RAW RNA-seq DATA

Universal platform for processing RNA-seq from any species (model or non-model)

REPORT GENERATION

Summarize all executed analysis steps into a comprehensive report for proper documentation.

PROJECT MANAGEMENT

Create a user account to store your data and results, as well as resume your analysis.


News & Updates
  • Please reach us through our OmicsForum to ask questions or request features regarding EcoToxXplorer;
  • Updated housekeeping gene status for e2f1 in rainbow trout (05/23/2023);
  • Added support for three new species (double-crested cormorant, rainbow trout, and northern leopard frog) for EcoToxChip analysis (05/02/2023);
  • Upgraded the web framework to PrimeFaces 12.0.0 (11/03/2022);
  • Fixed a bug when doing DR with single replicate (05/27/2022);
  • Various feature enhancements and code refactoring based on user feedback (05/23/2022);
  • Upgraded the R version to 4.1.3 (05/15/2022);
  • Fixed the issue with reading empty lines in user uploaded data (03/23/2022);
  • Upgraded RNAseq processing to use our ExpressAnalyst platform (01/21/2022);
Read more ......

Publications

ACKNOWLEDGEMENTS