FEATURES

ECOTOXCHIP ANALYSIS

Directly analyze EcoToxChip results here to guide decision-making for several ecological species and use cases.

INTERACTIVE EXPLORATION

Generate common statistical plots (e.g., volcano plots or heatmaps) or use novel tools (e.g., EcoToxBMD, EcoToxMods) to analyze toxicogenomics data

SEVERAL DATA INPUTS

Start analysis using many types of inputs including RNAseq, microarray, or qPCR.

RAW RNA-seq DATA

Universal platform for processing RNA-seq from any species (model or non-model)

REPORT GENERATION

Summarize all executed analysis steps into a comprehensive report for proper documentation.

PROJECT MANAGEMENT

Create a user account to store your data and results, as well as resume your analysis.


News & Updates
  • Fixed a bug when doing DR with single replicate (05/27/2022);
  • Various feature enhancements and code refactoring based on user feedback (05/23/2022);
  • Upgraded the R version to 4.1.3 (05/15/2022);
  • Fixed the issue with reading empty lines in user uploaded data (03/23/2022);
  • Upgraded RNAseq processing to use our EcoOmicsAnalyst platform (01/21/2022);
  • Updated web framework to PrimeFaces 11 (01/07/2022);
  • Fixed bug in GDC QA/QC plot (11/29/2021);
  • Check out our EcoToxXplorer paper just released on Environ Toxicol Chem (11/12/2021);
  • Added a Resources page with links to annotation files for EcoToxChips and EcoToxModules (11/05/2021);
Read more ......

ACKNOWLEDGEMENTS